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Paycheck transfers-better to set up separate transfers after check is deposited?

I've had nothing but problems with paychecks. I set them up using the wizard, and had problems with transfers from the primary account to other banking/investment accounts. And, I've also had problems with the transaction in the primary account showing up in the register as the amount of a transfer to another account. Also, sounds like this may be caused by syncing with Quicken Cloud/Mobile from what I've seen in researching this.
Would it be better to do manual transfers from the primary account to the other accounts with separate transactions after paycheck is deposited, or does anyone know???
Would it be better to do manual transfers from the primary account to the other accounts with separate transactions after paycheck is deposited, or does anyone know???
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Answers
If you research Quicken Cloud Sync problems you will see that the paycheck problem is just one of the problems it has caused. Others are deleted memorized payees, deleted accounts, reconciled transactions becoming unreconciled, and the list goes on. Sure this doesn't happen to everyone, but it is certainly happening to quite a few people.
So I wouldn't be looking for a way workaround the current problem, I would avoid using Quicken Cloud Sync.